CDS
Accession Number | TCMCG051C01699 |
gbkey | CDS |
Protein Id | XP_024444920.1 |
Location | complement(join(9988276..9990291,9990443..9991103,9991394..9991476,9992261..9992375,9994035..9994189,9995103..9997886,9998002..9998109,9998743..9999519,9999646..9999747,10001042..10001251)) |
Gene | LOC18093999 |
GeneID | 18093999 |
Organism | Populus trichocarpa |
Protein
Length | 2336aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA17973 |
db_source | XM_024589152.1 |
Definition | protein CHROMATIN REMODELING 4 isoform X1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGAAGGATAACAGTTCAACAAGTAGTAAAATGATTAGCAGAAACTGGGTCTTGAAGCGAAAACGAAAAAAGATTCTGTATGGACGAGTTGTTTCTACTGGTAAAGAAGATAACTTGGAATCTCCAAGGAATACATCTGCTGCTAAACGCCGGCCAAAGAGTGAACAAAGTTCTGATCTATCTTCATCCAAGAAGAAAGGAAATGATGGGTATTACTATGAATGTGTAATCTGTGATCTTGGTGGCAACTTGTTGTGCTGTGATAGCTGTCCCCGGGTGTACCATCTACAGTGCCTTGATCCACCTCTTAAGCGCATTCCAATGGGGAAATGGCAATGCCCAAAGTGCTCTCAAAAAAGTGACCCACTGAAGTCCATTAGCCCACTGGGTTCCATTTCAAAACGTGCAAGAACAAAAATAATCACTACAAATTCTAGAACTGGATTTAAGTCATCTGGCACTGACAAAGTATCTGCGCTTTTCGGAAGCTCCATTGTCTCCAAGCGAAGGTCTTCCAGCAAGGGGAAATCGACTCTAACTGTTGGATCCAAATCCATTGAAAAGGAACCAGATTCGTCCTCAGATGTATTATGTAGCACCAAGTCATGTGATCCATCTGCTGTTAGTTCTGTAGATGGTACTTCATTGCATGTGAACATTGATGATGAAAAGAAATGTGATGCATCTCCAAAAGAGTCAACTGCAGGGAAGAAAACAATTTCCCTTGCTGATGAACTCTTTTCTCATTCTAAACTTACTGAATCCAAGCCAAATAATGAAGGTTCTGGTGAGAAGCATGTCTTGGCTTGTGATAATGGATCTCCAAGAAAGAAAATTGTTCTTGCAATTGGTGCAGCCTCCGAGAACAGGAAAAGAAAGCTTGAAGGCAATAGTGTGGACAGTGTTAAGAAGCCCAGGACCAACAAGGGAAAGCGCACCTCCATAAAATATAGACCCAAAGCCAATAATGCAAGTTCTGGAACTAGTAAATTGAACCAGAAACGGAAAACCATTAATCATGAAGTTTCGTTACTTTTGCCAACAGAAGATGTTGAAGTCAAGAACATAGAATTGCAGAAAAAGGACGAGAAGAATCCTGTGGAAGTTGCACAACCATTAGAAGAGTCGTATAAAGCAGAGGTTCATGTGGATGAAACCCAGAAATGTGAGGATATTGTCATGACCGAACTTCAGCAGGTTGATCGGGTATTGGGGTGTCGGATTGAAGGTGAAAATGCAAGCTTGTCATGCTGTACATCTCTGATTTCAAAAAATGACCGGCCTTCTGATGAATTGCTTATATCAGAGACTGAAAATGGACATGTGGAGGAAAAAGCCGCTGGTGACACATATTCAGATCTCGGGGTTGCTGAAAATCATGTTGAGGGTCATCCTGGTGTTATTGAAAGTTCTGAGAAGGATGAAAGTGTGAAGAATGACATTAGAGTGGATACAATACGTGTATACAGAAGATCTGCTAGCAAAGACTATAAAGGAGGGAACAGCAAGGATTTACTGGGGAAAGATGGAAAAGATTCAGGTTCTGGAGGCATTAGTGGTAAGGATCAAGATGAATCTGCAGTAACAACAGAAGTAATGGTGAAAAGACATGAAAATCCGGTGATTGAAGAAACTACTGATTTTTGTTTGAAAAACTCAGATGCAGATCAAATTTCTGAAGTTTGTGAAATGCATGTCTCTCCTGAAACCAAGGACACAAAAGAAGAAGATATGAAAATCAAAACTTCTAGTAGTGAAAATAAAGTCCCGGAGCCTGCCATGGAAGAACTAGCATGTGCTAACAAAGACACAACATCATATGAATTCCTAGTTAAGTGGGTAGGGAGGTCTCATATACATAACAGTTGGATCTCAGAATCCCAGCTGAAAGCTCTTGCAAAGAGAAAACTAGAAAATTATAAGGCTAAGTATGGAACAGCTTTGATAAATATCTGTGAGGAAAAGTGGAAGCAGCCCCAGCGAGTAATTGCTCTCCGTGCTTCTGAGGATGGCAGCCGTGAAGCTTTTGTAAAATGGACCGGTCTTCCATATGATGAATGCACTTGGGAAAGTCTGGATGATCCTGTTCTTAAAAAATCAGTTCATCTAATCAATCAGTTCAGTCAGTTTGAGCGCCAGACATTGGAAAAAGATTCTGCGAGGGATGATCTACAAAAAGGGAGGTGTGATGGTCTGCAAAATGAAATTGCTACTCTGATGGAGCAACCGGAGGAACTAAAAGGAGGTTCCTTGTTTCCTCACCAGCTTGAGGCATTGAATTGGTTGCGTAAGTGTTGGCATAAATCCAAAAATGTAATACTTGCTGATGAGATGGGGCTGGGGAAAACAGTATCTGCTTGTGCTTTCCTTTCATCTTTGTATTTTGAGTTCAGAGCTTCTCTCCCGTGCTTGGTCTTGGTTCCACTTTCAACAATGCCTAACTGGTTCTCTGAGTTTGCACTGTGGGCTCCCAACTTAAATGTTGTGGAGTACCATGGGTGTGCAAAAGCAAGGGCCATGATTCGCCTGTATGAATGGCATGCTAGTGATCCCAATAAGATGAACAAGAAAACCACTTCCTACAAATTTAATGTTCTTTTAACCACTTACGAAATGGTTCTTGCGGATTCCACTTATTTGCGTGGAGTTCCTTGGGAAGTTCTTGTGGTTGATGAGGGCCATAGACTTAAGAATTCAGGGAGTAAGCTGTTCAGCTTGCTCAACACATTCTCTTTCCAACACCGTGTTCTTTTGACTGGTACCCCTCTTCAGAATAACATTGGCGAGATGTATAATTTGCTCAATTTCTTACAGCCAGCATCATTTCCTTCTCTAACTTCCTTTGAGGAGAAATTTAATGATCTCACAACAGCTGAAAAGGTCGAAGAATTGAAGAAACTTGTTGCACCACACATGCTTCGAAGGCTTAAAAAAGATGCTATGCAAAATATCCCCCCCAAGACAGAACGGATGGTTCCTGTTGAGTTGTCTTCTATCCAAGCTGAATATTACCGAGCAATGCTAACGAAGAATTATCAAATGTTACGGAATATTGGGAAAGGAGTTGCACAACAATCGATGCTAAACATTGTGATGCAGCTGAGAAAAATTTGCAATCATCCATATCTCATACCAGGTACCGAGCCTGATTCTGGGTCACTAGAATTTCTTCATGAAATGCGAATAAAAGCTTCGGCCAAGTTGACTTTGCTGCATTCCATGCTCAAGATCTTATACAAGGAAGGTCATAGAGTTCTGATTTTTTCACAAATGACCAAGCTTCTTGATATCCTTGAGGATTATTTGACCATAGAGTTTGGCCCTAAAACATATGAAAGGGTGGATGGTTCTGTATCAGTCTCGGATCGCCAGACAGCAATTGCACGTTTTAACCAAGACAAAAGTCGATTTGTCTTCTTGTTATCAACGCGCTCTTGTGGCCTTGGAATCAATTTAGCAACCGCAGACACTGTCATTATTTATGATTCTGATTTCAACCCACATGCTGATATCCAAGCTATGAATCGAGCACATCGAATTGGGCAATCCAAAAGACTTCTGGTGTACAGGCTTGTTGTTCGTGCCAGTGTTGAAGAGCGCATCTTGCAACTTGCTAAAAAAAAACTAATGCTTGATCAGCTCTTTGTCAACAAGTCTGGGTCTCAGAAGGAAGTGGAAGATATTCTACGATGGGGAACAGAAGAGCTTTTTAGTGAATCTTCTAGCATGAATGGAAAAGATAATAGTGACAATAATATCAACAAAGATAAAGATGACACAATAGCAGATCTGGAGCAGAAGCAGAGGAAGAGGAGTGGTGGCCTTGGGGATGTGTACCAAGATAAATGTACAGATGGTGGCAACAAGATTGTGTGGGATGAAAATGCTATATCAAAGTTACTTGACCGCACAAACCTCCAGTCTGCATCAACTGATGCTGCTGAAGGAGATTTTGAGAATGAAATGCTTGGCTCAGTAAAGTCCTTGGAATGGAATGATGAAACAACAGAAGAGCAAGGGGGAGCTGAATCACTAGTTGTGGTTGATGATACCTGCGGACAAAATCCTGAAAGGAAAGAGGACAATGTGGTAAATGTTACTGAAGAAAATGAATGGGACAGGCTTTTGCGTTTAAGATGGGAGAAGTATCAAAACGAGGAGGAAGCTGCTCTTGGTCGAGGGAAACGCTTGAGGAAAGCTGTCTCATACAGGGAAGCTTATGCCCCGCATCCAAATGAAACTTTGAATGAGAGTGGTGGTGAAGAGGACCAGGAGCCTGAAGCAGAGCCTGAGCGGGAATATACACCGGCTGGAAGAGCTCTAAAGGCAAAATACACTAAGCTTCGCTCTAGACAAAAAGAACGCCTTGCTCAGCGGAATGCAATTGAAGTATTTCGTCCTAATGAGGGGCTTCCTGTACGTGAGTTGGTTCTTCATTGCCCTCCCACCAACGAAATAGACAGGGATCGGGCCATGGAGTTTGCTCAACAAGGCAGAGAGAAGGCGTTTGTAATTAACTTGGAGGATGACGAGTTCAGTCAGCAAGATGCAACAAAGAGAAATGCCGATGCAACCATAAAGTTGGGCCACCTATCTAATCATAAATTGAGCAGTCATCTGGATCTTTCTATGAACTCTCTTGGACACCCCTCCTCTGACACTATCCTTCCAATTCACCAAAATCACGGCAGAGGCAATAAAAACTTGCTTTCTTCCAACAATCAGTTACCTGTTCTGGGACTCTGTGCTCCCAATGCTAATCAATTGGATTTGTTGCACAAAAGCTCTTCAAGATCAAAGGGTCAACAAAGCAAGCCAGTGCCTGGACCAGAGTTTCCATTTAGTCTACCTCCTTGCTCTGAAACTTCAATTGAGATGGATATAAAACATCAGGAGCCTGCATCAGACAAGCCAAAATTGCTAGATGCATCAGCTGAGATTTTGCAACCGCGTCTTAAAAATAACTTTGCAGATGGTTGGCACTCGTTTAGTCCGTGTCCACCTATATCACAAGGGAAGGATTCTGATCACTTGGAAGGTTCCAGTTCTAGTTTTGCTGGTTTCCAGGAAAAGATGTCACTGCCAAACTTTCCTTTTGATGAGAATTTGTTGTCCAGATTTCCACTTCCTTCCAAGAGCATGCCTAGTAACCATGACTTATTACCAAGCTTGTCACTGGGGAGAAGACTTGAAGCTGTTAACGACTCTACTCGAGACCTTCCAGCAATGCCATTGTTGCCCAATTTGAAATTTCCCCCTCAAGATGCAACAAGATATAATCAGTTAGAGAGGGAGGTTCCTCCGACACTGGGTTTGGGTCAGATGCCATCTGCTTTTTCATCATTTCCTGAAAACCACAGAAAGGTGCTTGAGAACATAATGATGAGGACTGGCTCTGGATCAAGTAGCTTGTATAGAAAGAAATCAAAAATAGATGTTTGGTCTGAGGATGAACTTGATTTCCTTTGGGTTGGTGTTCGGAGATATGGAAGGGGTAATTGGGATGCCATTCTTAGAGACCCCAGGTTAAAATTCTCGAAGTACAAAACTTCAGAAGATTTAGCAGCTAGGTGGGAGGAGGAACAATTCAAGTTCTTGGATGGGTCTGCCTTTCCATTGCCAAAGATGATGAAGCCAACAAAGTCCTCCAAATCATCCTTGTTCCCAAGCATTCCTGAGGGAATGATGACACGGGCTTTGCATGGAAGCAGACTCGTTACCCCGTCAAAGTTTCAGTCACATCTGACGGACATGAAATTGGGTTTTGGTGATCTGTCTTCTAGCCTACCACATCTTGAGCCGCTGGATCAATTTAGTTTGCAGAATGAGCATTTTGGACCAATTCCAACTTGGAATTCGGATGAGTTGCGGGTAAGTTTTGTTGGAGATTCTTCAATGGGACCATCACATGTTTCCTCTGAAAAACCATTTCTGCTCAATTCTTTTGGAGCAAGCACCTTGGCAACTCTTGGATTGAATTCCTCAAGCAACTTTGATTTACAGCGAAGAGAAGAGGAATACAATACCATGAAGTATGGGAAATCACCTAGCCTTCTAGATAGATCATTACATATATTGCACGATTCCCATAACAATGTGGGAAGTGGTGAATTAAGCAGTTCAGCATTGTTCTTGGACCCAAATAAAGTGTTGAATCCATTCCATTCAAAGGGCAAAGAAGTAGTTGGAAGCAGTTCGTCGAACAAGCTGCCTCATTGGCTTCGGGAAGCTGTAAGTGCTCCTCCTGTCAAACCAGCTATTCCTGACCTGCCACCCACTGTATCAGCAATAGCTCAATCAGTTCGTGTGCTATATGGAGAAAATCAGCCAACTATTCCTCCTTTTATTGTACCCGGTCCACCTCCCTCCCAACCAAAGGATCCAAGAAGGATTTTGAGGAAGAAAAAGAAGCGGAGGTCACATATGTTCAGGCAGTTCCCACTAGATATTGGGGGAAGTAGCCAGGATTTTAGAAATAGCATCCATGGCAGTAATGTTGCTTCGACCTCTATCCCACAGGTCCCACCATTAGTTCATGAAACTTCGGGCCCATGGAATGAATCTGACTTTAACCTGCCTCTTCCCAGTTTACACAAGATGAATTCGTTGACTTCATCTGCTTATTTAAACATACAGAAGAAAACTACCATGGGATTGTCCCCCTCCCCTGAAGTTCTTCAATTGGTAGCATCCTGTGTTGCTCCAGGCCCTCATTTATCCTCTGGTTCTGGTGCAACAAGCTCGAGCCTCCATGAAAGTAAAGTACCATTGCCAAAATCTCCTGACCAAGTTGGAATTTCAGATCCACTAGGTGCTTTGGAAGAACCTATGGACACAGAAAGGTCGCCCCCTCAGGTGCAGTGCATTCCAGAGAAGAGACTGGACCAACCTGATAGTGGAGACTCTAGCAAGACCGAGTCAGATCTTTCTCCGATCAAACAGCCTGATGTAGAGGACATATCTTCTGAGGGAACTCTATCAGATCATCCTGTGAGTGACCAAGAACCATAG |
Protein: MKDNSSTSSKMISRNWVLKRKRKKILYGRVVSTGKEDNLESPRNTSAAKRRPKSEQSSDLSSSKKKGNDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKCSQKSDPLKSISPLGSISKRARTKIITTNSRTGFKSSGTDKVSALFGSSIVSKRRSSSKGKSTLTVGSKSIEKEPDSSSDVLCSTKSCDPSAVSSVDGTSLHVNIDDEKKCDASPKESTAGKKTISLADELFSHSKLTESKPNNEGSGEKHVLACDNGSPRKKIVLAIGAASENRKRKLEGNSVDSVKKPRTNKGKRTSIKYRPKANNASSGTSKLNQKRKTINHEVSLLLPTEDVEVKNIELQKKDEKNPVEVAQPLEESYKAEVHVDETQKCEDIVMTELQQVDRVLGCRIEGENASLSCCTSLISKNDRPSDELLISETENGHVEEKAAGDTYSDLGVAENHVEGHPGVIESSEKDESVKNDIRVDTIRVYRRSASKDYKGGNSKDLLGKDGKDSGSGGISGKDQDESAVTTEVMVKRHENPVIEETTDFCLKNSDADQISEVCEMHVSPETKDTKEEDMKIKTSSSENKVPEPAMEELACANKDTTSYEFLVKWVGRSHIHNSWISESQLKALAKRKLENYKAKYGTALINICEEKWKQPQRVIALRASEDGSREAFVKWTGLPYDECTWESLDDPVLKKSVHLINQFSQFERQTLEKDSARDDLQKGRCDGLQNEIATLMEQPEELKGGSLFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFLSSLYFEFRASLPCLVLVPLSTMPNWFSEFALWAPNLNVVEYHGCAKARAMIRLYEWHASDPNKMNKKTTSYKFNVLLTTYEMVLADSTYLRGVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLTSFEEKFNDLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQMLRNIGKGVAQQSMLNIVMQLRKICNHPYLIPGTEPDSGSLEFLHEMRIKASAKLTLLHSMLKILYKEGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVSDRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFSESSSMNGKDNSDNNINKDKDDTIADLEQKQRKRSGGLGDVYQDKCTDGGNKIVWDENAISKLLDRTNLQSASTDAAEGDFENEMLGSVKSLEWNDETTEEQGGAESLVVVDDTCGQNPERKEDNVVNVTEENEWDRLLRLRWEKYQNEEEAALGRGKRLRKAVSYREAYAPHPNETLNESGGEEDQEPEAEPEREYTPAGRALKAKYTKLRSRQKERLAQRNAIEVFRPNEGLPVRELVLHCPPTNEIDRDRAMEFAQQGREKAFVINLEDDEFSQQDATKRNADATIKLGHLSNHKLSSHLDLSMNSLGHPSSDTILPIHQNHGRGNKNLLSSNNQLPVLGLCAPNANQLDLLHKSSSRSKGQQSKPVPGPEFPFSLPPCSETSIEMDIKHQEPASDKPKLLDASAEILQPRLKNNFADGWHSFSPCPPISQGKDSDHLEGSSSSFAGFQEKMSLPNFPFDENLLSRFPLPSKSMPSNHDLLPSLSLGRRLEAVNDSTRDLPAMPLLPNLKFPPQDATRYNQLEREVPPTLGLGQMPSAFSSFPENHRKVLENIMMRTGSGSSSLYRKKSKIDVWSEDELDFLWVGVRRYGRGNWDAILRDPRLKFSKYKTSEDLAARWEEEQFKFLDGSAFPLPKMMKPTKSSKSSLFPSIPEGMMTRALHGSRLVTPSKFQSHLTDMKLGFGDLSSSLPHLEPLDQFSLQNEHFGPIPTWNSDELRVSFVGDSSMGPSHVSSEKPFLLNSFGASTLATLGLNSSSNFDLQRREEEYNTMKYGKSPSLLDRSLHILHDSHNNVGSGELSSSALFLDPNKVLNPFHSKGKEVVGSSSSNKLPHWLREAVSAPPVKPAIPDLPPTVSAIAQSVRVLYGENQPTIPPFIVPGPPPSQPKDPRRILRKKKKRRSHMFRQFPLDIGGSSQDFRNSIHGSNVASTSIPQVPPLVHETSGPWNESDFNLPLPSLHKMNSLTSSAYLNIQKKTTMGLSPSPEVLQLVASCVAPGPHLSSGSGATSSSLHESKVPLPKSPDQVGISDPLGALEEPMDTERSPPQVQCIPEKRLDQPDSGDSSKTESDLSPIKQPDVEDISSEGTLSDHPVSDQEP |